prevampire.get_skel_df#
- prevampire.prevampire.get_skel_df(skel_arr, skel_name_list, show=0)[source]#
Process a list of skeletonized images, extract properties, and display branch types.
- Parameters:
- skel_arrlist
A list of skeletonized images or arrays.
- skel_name_listlist
A list of names corresponding to the skeletonized images.
- showint, optional
The number of images to display branch types. Defaults to 0.
- Returns:
- pd.DataFrame
A Pandas DataFrame containing skeletonization properties.
Notes
The function processes a list of skeletonized images and extracts properties using the skan library.
Skeletonization properties are summarized, and a Pandas DataFrame is created.
The show parameter determines the number of images for which branch types are displayed.
To print out the DataFrame, type the name of the DataFrame you set and press enter.